Basic Information
Locus ID:
Sgl11516
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 10811210 | 10816555 | - | Sgl11516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 63,256.92 Da | 37.39 | 69.45 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 82 | 209 | 2.70889E-36 | IPR033734 |
| CDD | cd20251 | Complex1_LYR_SF | 15 | 55 | 2.28942E-12 | - |
| CDD | cd09612 | Jacalin | 411 | 534 | 8.79165E-38 | IPR033734 |
| CDD | cd09612 | Jacalin | 254 | 342 | 1.99899E-27 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 403 | 533 | 1.3E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 81 | 210 | 8.8E-27 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 250 | 342 | 1.5E-16 | IPR001229 |
| Pfam | PF05347 | Complex 1 protein (LYR family) | 15 | 49 | 2.1E-5 | IPR008011 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 245 | 342 | 2.62E-21 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 391 | 533 | 1.57E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 70 | 210 | 1.15E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 385 | 534 | 4.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 237 | 342 | 8.2E-27 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 58 | 208 | 7.4E-39 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 403 | 535 | 5.7E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 230 | 344 | 3.0E-8 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 81 | 210 | 7.2E-26 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 67 | 210 | 34.663464 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 392 | 535 | 46.603184 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 250 | 344 | 21.185553 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021851045.1 | jacalin-related lectin 3-like [Spinacia oleracea] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG8 | Jacalin-related lectin 3-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology