Basic Information
Locus ID:
Sgl11480
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 10583992 | 10588755 | + | Sgl11480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 42,176.14 Da | 29.71 | 89.43 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 149 | 261 | 6.7E-7 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 78 | 346 | 2.56E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 33 | 352 | 4.1E-63 | IPR015943 |
| SMART | SM00320 | WD40_4 | 132 | 170 | 0.022 | IPR001680 |
| SMART | SM00320 | WD40_4 | 174 | 212 | 7.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 77 | 115 | 89.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 346 | 5.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 264 | 303 | 46.0 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_021755153.1 | SEC12-like protein 2 [Chenopodium quinoa] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A803M4G0 | ANAPC4_WD40 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology