Basic Information
Locus ID:
Sgl11067
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 7974815 | 7979318 | - | Sgl11067 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 79,599.32 Da | 41.85 | 92.99 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 9 | 161 | 2.536E-27 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 631 | 672 | 2.56982E-21 | - |
| Pfam | PF04564 | U-box domain | 627 | 698 | 1.7E-15 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 381 | 597 | 7.6E-25 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 624 | 698 | 1.59E-22 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 7 | 126 | 1.05E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 597 | 1.2E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 610 | 2.5E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 319 | 430 | 6.6E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 625 | 699 | 1.5E-24 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 7 | 157 | 3.6E-8 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 630 | 693 | 6.3E-21 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 626 | 700 | 33.730419 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 609 | 20.951548 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 243 | - | - |
| Coils | Coil | Coil | 306 | 333 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_019103691.2 | U-box domain-containing protein 33 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RIZ0 | Serine/threonine-protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_061310 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology