Basic Information
Locus ID:
Sgl10255
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
BURP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 1507745 | 1519941 | + | Sgl10255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 62,305.03 Da | 34.08 | 92.09 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03181 | BURP domain | 353 | 566 | 2.8E-60 | IPR004873 |
| Pfam | PF00400 | WD domain, G-beta repeat | 14 | 49 | 0.0054 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 83 | 1.39E-7 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 106 | 3.6E-8 | IPR015943 |
| SMART | SM01045 | BURP_2 | 351 | 568 | 1.7E-45 | IPR004873 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 17 | 51 | 10.258324 | - |
| ProSiteProfiles | PS51277 | BURP domain profile. | 353 | 568 | 47.227745 | IPR004873 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 17 | 58 | 12.914561 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25610.1 | BURP domain-containing protein. responsive to dehydration 22 (RD22) mediated by ABA | 0 |
| RefSeq | XP_048491899.1 | BURP domain-containing protein 5-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q942D4 | BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4S4EF48 | BURP domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004988 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah024283 |
| Amaranthaceae | Salicornia bigelovii | 12 | Sbi_jg14106, Sbi_jg27750, Sbi_jg32715, Sbi_jg32718 ... |
| Amaranthaceae | Salicornia europaea | 11 | Seu_jg10013, Seu_jg10691, Seu_jg10693, Seu_jg10705 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019651 |
| Amaranthaceae | Suaeda glauca | 20 | Sgl00053, Sgl00058, Sgl05126, Sgl05131, Sgl05152, Sgl10255 ... |