Basic Information
Locus ID:
Sgl09699
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 56597952 | 56610680 | + | Sgl09699 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.55 | 81,962.00 Da | 140.59 | 49.75 | -1.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 286 | 353 | 5.13E-9 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 257 | 392 | 8.9E-9 | IPR015943 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 321 | 353 | 8.703868 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 650 | - | - |
| Coils | Coil | Coil | 494 | 527 | - | - |
| Coils | Coil | Coil | 418 | 449 | - | - |
| Coils | Coil | Coil | 534 | 594 | - | - |
| Coils | Coil | Coil | 603 | 674 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50590.2 | - | 0 |
| RefSeq | XP_010693356.2 | uncharacterized protein LOC104906319 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A438KQ03 | WD_REPEATS_REGION domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_000309 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||