Basic Information
Locus ID:
Sgl09662
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 56099867 | 56100651 | + | Sgl09662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 27,084.73 Da | 37.86 | 79.24 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 41 | 125 | 5.34864E-7 | IPR003340 |
| SUPERFAMILY | SSF68906 | SAP domain | 180 | 215 | 4.58E-5 | IPR036361 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 43 | 126 | 8.63E-14 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 38 | 128 | 3.7E-13 | IPR015300 |
| SMART | SM01019 | B3_2 | 35 | 127 | 0.0016 | IPR003340 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 34 | 127 | 9.88298 | IPR003340 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050913107.1 | B3 domain-containing transcription factor VRN1-like [Pisum sativum] | 0 |
| TrEMBL | A0A2P5DZF1 | B3 DNA binding domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_237260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||