Basic Information
Locus ID:
Sgl09123
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Uncharacterized protein K02A2.6-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 44032045 | 44036738 | + | Sgl09123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 62,211.80 Da | 47.40 | 85.45 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 386 | 535 | 9.21386E-57 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 470 | 535 | 3.0E-7 | IPR000477 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 134 | 255 | 1.5E-16 | IPR001245 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 363 | 535 | 6.23E-52 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 316 | 5.41E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 329 | 3.6E-6 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 428 | 535 | 3.6E-43 | IPR043128 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 261 | 5.2E-22 | - |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 361 | 488 | 3.6E-43 | - |
| SMART | SM00220 | serkin_6 | 117 | 316 | 4.4E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 117 | 446 | 11.891654 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021849108.1 | uncharacterized protein LOC110788778 [Spinacia oleracea] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RAV1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_091960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||