Basic Information
Locus ID:
Sgl08608
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Uncharacterized protein K02A2.6-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 33309734 | 33316579 | + | Sgl08608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 87,469.84 Da | 43.33 | 75.98 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 687 | 771 | 8.09008E-28 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 648 | 771 | 7.23E-34 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 650 | 771 | 1.1E-26 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 729 | 756 | 1.1E-26 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 65 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048492954.1 | uncharacterized protein LOC125493542 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A438I1G8 | Transposon Ty3-I Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-I_56 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||