Basic Information
Locus ID:
Sgl08324
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 28999859 | 29003376 | - | Sgl08324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 41,767.75 Da | 38.90 | 100.05 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 241 | 293 | 9.8E-20 | IPR004854 |
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 140 | 204 | 2.8E-23 | IPR004854 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 328 | 380 | 1.4E-13 | IPR027410 |
| Gene3D | G3DSA:3.10.330.10 | - | 239 | 291 | 2.4E-20 | - |
| Gene3D | G3DSA:3.30.260.10 | - | 324 | 377 | 1.4E-11 | IPR027410 |
| Gene3D | G3DSA:2.40.40.50 | - | 45 | 200 | 1.4E-25 | IPR042299 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_010690750.1 | ubiquitin fusion degradation protein 1 homolog isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DBS3 | Ubiquitin fusion degradation protein 1 homolog (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology