Basic Information
Locus ID:
Sgl08211
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 27660444 | 27661897 | + | Sgl08211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 54,074.92 Da | 46.84 | 76.30 | -0.70 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021713456.1 | uncharacterized protein LOC110681610 [Chenopodium quinoa] | 0 |
| TrEMBL | A2I5F8 | Integrase OS=Beta vulgaris OX=161934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 28 | Sgl00169, Sgl03111, Sgl03123, Sgl05219, Sgl08211, Sgl10299 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120106406 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132613087 |