Basic Information
Locus ID:
Sgl07923
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 24843053 | 24851914 | + | Sgl07923 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 44,369.64 Da | 36.67 | 96.30 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 77 | 340 | 7.0E-87 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 74 | 340 | 2.06E-38 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 105 | 401 | 2.6E-88 | IPR027417 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 73 | 394 | 6.0E-99 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 105 | 264 | 27.883774 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 274 | 345 | 16.569889 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 163 | 192 | 9.8E-60 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 235 | 264 | 9.8E-60 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 316 | 345 | 9.8E-60 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 369 | 386 | 9.8E-60 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 283 | 311 | 9.8E-60 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 197 | 226 | 9.8E-60 | IPR013765 |
| Coils | Coil | Coil | 369 | 389 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010672926.2 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RW12 | DNA repair protein recA homolog 2, mitochondrial OS=Spinacia oleracea OX=3562 GN=SOVF_021920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology