Basic Information
Locus ID:
Sgl06580
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Lipid phosphate phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 15322757 | 15337853 | - | Sgl06580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 56,129.38 Da | 41.50 | 91.77 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03390 | PAP2_containing_1_like | 239 | 425 | 7.0402E-85 | - |
| CDD | cd00195 | UBCc | 3 | 142 | 4.75183E-74 | IPR000608 |
| Pfam | PF01569 | PAP2 superfamily | 282 | 425 | 2.0E-30 | IPR000326 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 5 | 141 | 1.8E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 2 | 144 | 2.69E-64 | IPR016135 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 202 | 431 | 1.27E-39 | IPR036938 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 144 | 9.5E-73 | IPR016135 |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 200 | 434 | 7.6E-40 | - |
| SMART | SM00014 | acid_phosph_2 | 281 | 422 | 1.7E-22 | IPR000326 |
| SMART | SM00212 | ubc_7 | 4 | 147 | 5.5E-77 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 147 | 59.242977 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 74 | 89 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 497 | - | - |
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15080.1 | lipid phosphate phosphatase 2. Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. | 0 |
| RefSeq | XP_010681726.2 | lipid phosphate phosphatase 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI60 | Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=LPP2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KUU1 | acidPPc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology