Basic Information
Locus ID:
Sgl06304
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Avr9 Cf-9 rapidly elicited protein 65
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 13107964 | 13108257 | - | Sgl06304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 10,846.09 Da | 41.11 | 59.17 | -0.67 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54165.1 | 0 | |
| RefSeq | XP_021775068.1 | transmembrane protein DDB_G0273707/DDB_G0273361-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0J8B8Y1 | Avr9/Cf-9 rapidly elicited protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_000110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg2117, jg2123, jg2129, jg3702 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018506 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg25601 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26290 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017844 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl01218, Sgl01219, Sgl06304 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0006070, CQ.Regalona.r1.3BG0006200 |
| Apiaceae | Apium graveolens | 2 | Ag10G02479, Ag4G02611 |
| Arecaceae | Cocos nucifera | 4 | COCNU_07G001830, COCNU_10G001290, COCNU_10G001300 ... |
| Asteraceae | Flaveria trinervia | 4 | Ftri14G10312, Ftri4G32310, Ftri7G04480, Ftri7G22626 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT1G32920.1, AT1G32928.1, AT5G54165.1 |
| Brassicaceae | Eutrema salsugineum | 5 | Thhalv10009230m.g.v1.0, Thhalv10009241m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp1g28080.v2.2, Sp6g06920.v2.2, Sp6g06940.v2.2 ... |
| Brassicaceae | Brassica nigra | 5 | BniB04g049620.2N, BniB04g049630.2N, BniB07g017180.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0665 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g04750 |
| Plantaginaceae | Plantago ovata | 5 | Pov_00003078, Pov_00011002, Pov_00011087, Pov_00011217 ... |
| Poaceae | Echinochloa crus-galli | 8 | AH06.127, AH06.128, AH09.119, BH06.215, BH09.195, CH06.201 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0507510, gene-QOZ80_6AG0507520 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0096580.1 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G000720, Oco08G000610 |
| Poaceae | Oryza sativa | 3 | LOC_Os04g02880.1, LOC_Os06g04230.1, LOC_Os06g04240.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_06G015000, gene-BS78_10G025100 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr11G023700, Chr14G001220, Chr21G000310, Chr25G016220 |
| Poaceae | Thinopyrum elongatum | 6 | Tel2E01G033700, Tel3E01G137600, Tel7E01G155800 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG000970, gene_TRIDC2BG000850 ... |
| Poaceae | Triticum aestivum | 28 | TraesCS1A02G381400.1.cds1, TraesCS1B02G403900.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb378110_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-40329, nbis-gene-40330, nbis-gene-53834 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29050, Zma_g29051, Zma_g31295 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG02.1376, evm.TU.LG09.593, evm.TU.LG09.594 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc04g21440, gene.Posoc06g08740, gene.Posoc06g09270 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4205 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8698 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000007l.190 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018680 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10526 |
| Salicaceae | Populus euphratica | 4 | populus_peu00217, populus_peu00218, populus_peu17234 ... |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132632162, gene-LOC132632163, gene-LOC132634086 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI000935600, SOLCI003489800, SOLCI005220900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107013841, gene-LOC107013844, gene-LOC107014669 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.13453_chr07_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G1253 |
| Zosteraceae | Zostera marina | 1 | Zosma05g31370.v3.1 |