Basic Information
Locus ID:
Sgl05608
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB1 | 7515807 | 7517349 | - | Sgl05608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 47,665.08 Da | 52.12 | 77.66 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 213 | 247 | 2.2E-9 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 150 | 201 | 1.2E-6 | - |
| Pfam | PF00646 | F-box domain | 23 | 65 | 2.5E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 80 | 7.72E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 122 | 383 | 4.84E-35 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 118 | 400 | 3.1E-30 | IPR015915 |
| SMART | SM00612 | kelc_smart | 163 | 211 | 3.9E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 25 | 65 | 0.007 | IPR001810 |
| SMART | SM00612 | kelc_smart | 213 | 261 | 2.4E-6 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 120 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010672540.2 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QG85 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology