Basic Information
Locus ID:
Sgl04258
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
cyclin-dependent kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 47650342 | 47652941 | - | Sgl04258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 21,255.55 Da | 35.33 | 91.63 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 31 | 175 | 1.3E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 175 | 1.16E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 184 | 2.1E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 28 | 104 | 1.1E-26 | - |
| SMART | SM00220 | serkin_6 | 31 | 182 | 2.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 184 | 24.400244 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 142 | 154 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10270.1 | cyclin-dependent kinase C;1. Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. | 0 |
| RefSeq | XP_048503511.1 | cyclin-dependent kinase C-2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LFT8 | Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana OX=3702 GN=CDKC-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438FLT7 | Cyclin-dependent kinase C-1 OS=Vitis vinifera OX=29760 GN=CDKC-1_5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||