Basic Information
Locus ID:
Sgl03951
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 41207338 | 41217414 | - | Sgl03951 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 39,413.62 Da | 36.93 | 77.08 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 13 | 341 | 3.1E-69 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 13 | 344 | 6.22E-60 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 240 | 312 | 3.48E-7 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 239 | 311 | 4.8E-89 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 341 | 4.8E-89 | - |
| SMART | SM00636 | 2g34 | 9 | 341 | 8.1E-71 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 9 | 356 | 55.500504 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 110 | 118 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_021741381.1 | acidic mammalian chitinase-like [Chenopodium quinoa] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3W0 | GH18 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_109800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology