Basic Information
Locus ID:
Sgl02542
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 22188588 | 22189478 | + | Sgl02542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 33,539.50 Da | 41.31 | 74.70 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 158 | 203 | 8.6E-9 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 112 | 155 | 3.0E-8 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 84 | 256 | 1.7E-36 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 48 | 4.19E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 52 | 264 | 7.5E-37 | IPR015915 |
| SMART | SM00256 | fbox_2 | 12 | 52 | 1.2E-5 | IPR001810 |
| SMART | SM00612 | kelc_smart | 120 | 168 | 8.9E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.6E-4 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 53 | 8.676143 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010693831.1 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N5MCG5 | F-box domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_010195 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology