Basic Information
Locus ID:
Sgl02509
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 21969267 | 21973259 | + | Sgl02509 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 115,133.98 Da | 34.10 | 96.07 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 190 | 232 | 4.70994E-6 | IPR018392 |
| CDD | cd14066 | STKc_IRAK | 745 | 1009 | 2.6987E-83 | - |
| CDD | cd00118 | LysM | 115 | 171 | 0.0010448 | IPR018392 |
| Pfam | PF13855 | Leucine rich repeat | 582 | 641 | 7.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 307 | 364 | 2.9E-10 | IPR001611 |
| Pfam | PF01476 | LysM domain | 194 | 233 | 2.2E-7 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 742 | 1005 | 1.3E-50 | IPR000719 |
| Pfam | PF01476 | LysM domain | 116 | 172 | 0.14 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 188 | 233 | 5.23E-6 | IPR036779 |
| SUPERFAMILY | SSF52058 | L domain-like | 263 | 651 | 9.01E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 721 | 1008 | 7.28E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 249 | 539 | 1.8E-63 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 702 | 813 | 1.2E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 541 | 666 | 5.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 177 | 239 | 3.6E-9 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 814 | 1024 | 2.6E-55 | - |
| SMART | SM00220 | serkin_6 | 739 | 1012 | 1.0E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 604 | 628 | 21.0 | IPR003591 |
| SMART | SM00257 | LysM_2 | 115 | 172 | 0.34 | IPR018392 |
| SMART | SM00257 | LysM_2 | 189 | 233 | 7.0E-7 | IPR018392 |
| SMART | SM00369 | LRR_typ_2 | 329 | 352 | 0.0015 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 306 | 328 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 353 | 374 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 403 | 426 | 47.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 739 | 1013 | 38.392902 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 188 | 232 | 12.90245 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 859 | 871 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 745 | 767 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021749180.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LZJ6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology