Basic Information
Locus ID:
Sgl02440
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 21466133 | 21467662 | - | Sgl02440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 32,058.62 Da | 51.52 | 94.69 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 6 | 48 | 8.0E-10 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 94 | 284 | 2.2E-25 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 67 | 6.64E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 48 | 1.5E-9 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 9.1E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 48 | 13.127202 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02240.1 | F-box family protein. | 0 |
| RefSeq | XP_021839008.1 | F-box protein PP2-B11-like [Spinacia oleracea] | 0 |
| Q3E6P4 | F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L8N8 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012870 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02440, Sgl07593 |