Basic Information
Locus ID:
Sgl01721
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 16590364 | 16593268 | + | Sgl01721 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 62,120.69 Da | 42.44 | 85.46 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 69 | 327 | 6.06479E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 70 | 328 | 8.2E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 445 | 511 | 3.1E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 374 | 435 | 2.2E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 341 | 9.58E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 368 | 512 | 6.19E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 337 | 514 | 7.2E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 155 | 6.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 336 | 3.0E-60 | - |
| SMART | SM00054 | efh_1 | 486 | 514 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 447 | 475 | 0.0012 | IPR002048 |
| SMART | SM00054 | efh_1 | 411 | 439 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 375 | 403 | 2.9E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 70 | 328 | 1.3E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 328 | 49.912113 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 407 | 442 | 8.878534 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 482 | 517 | 12.839682 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 443 | 478 | 13.14653 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 371 | 406 | 14.290241 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 384 | 396 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 420 | 432 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 456 | 468 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 495 | 507 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 99 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 190 | 202 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 50 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010671825.1 | calcium-dependent protein kinase 24 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology