Basic Information
Locus ID:
Sgl01485
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 14895841 | 14902068 | + | Sgl01485 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 92,877.61 Da | 40.56 | 86.78 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 549 | 682 | 1.03734E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 703 | 745 | 1.6E-10 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 551 | 681 | 2.5E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 510 | 747 | 1.67E-58 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 511 | 682 | 3.2E-93 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 683 | 756 | 3.2E-93 | - |
| SMART | SM00382 | AAA_5 | 547 | 684 | 1.7E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 654 | 673 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 780 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 475 | - | - |
| Coils | Coil | Coil | 734 | 769 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010671575.1 | uncharacterized protein LOC104888335 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QMI3 | AAA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_167600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology