halophFGD

Basic Information

Locus ID: Sgl01217

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA1	12834356	12836758	-	Sgl01217

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.66	25,159.14 Da	30.91	91.92	-0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	48	158	4.68E-20	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	44	108	5.3E-23	-
SMART	SM00220	serkin_6	42	208	6.7E-5	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K14502 (shaggy-related protein kinase (protein brassinosteroid insensitive 2) [EC:2.7.11.1])

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G18710.2	Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.
RefSeq	XP_010686226.1	shaggy-related protein kinase eta [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q39011	Shaggy-related protein kinase eta OS=Arabidopsis thaliana OX=3702 GN=ASK7 PE=1 SV=2
TrEMBL	W9RDS1	non-specific serine/threonine protein kinase OS=Morus notabilis OX=981085 GN=L484_005815 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	2	Ah016390, Ah033370
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg36297, Sbi_jg36299
Amaranthaceae	Suaeda glauca	1	Sgl01217
Brassicaceae	Brassica nigra	1	BniB07g029680.2N
Poaceae	Oryza coarctata	2	Oco06G029160, Oco23G009390
Poaceae	Thinopyrum elongatum	4	Tel2E01G1045700, Tel2E01G622000, Tel3E01G579800 ... Tel5E01G808800
Poaceae	Triticum dicoccoides	3	gene_TRIDC1BG005820, gene_TRIDC7AG067580 ... gene_TRIDC7BG024590
Poaceae	Zoysia japonica	1	nbis-gene-34434