HalophFGD

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Basic Information
Locus ID: Sgl00997
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrA1 11254299 11257335 + Sgl00997
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.15 72,439.99 Da 42.97 89.17 -0.32
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 137 358 3.6E-10 IPR005135
SUPERFAMILY SSF56219 DNase I-like 132 364 9.55E-31 IPR036691
Gene3D G3DSA:3.60.10.10 Endonuclease/exonuclease/phosphatase 129 365 2.7E-33 IPR036691
Gene Ontology
Molecular Function:
GO:0003824 (catalytic activity)
KEGG Pathway
KO Term:
K21995 (cytochrome P450 family 77 subfamily A [EC:1.14.-.-])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019107211.1 uncharacterized protein LOC109136048 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A2N9ISI7 CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55207 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah006560
Amaranthaceae Suaeda glauca 23 Sgl00997, Sgl06055, Sgl14869, Sgl19579, Sgl20013, Sgl22557 ...
Sgl22836, Sgl27739, Sgl27967, Sgl30420, Sgl46173, Sgl47719, Sgl50869, Sgl63797, Sgl63850, Sgl68286, Sgl68340, Sgl74388, Sgl80086, Sgl80103, Sgl80137, Sgl82541, Sgl82596
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.6BG0020600
Plumbaginaceae Limonium bicolor 1 Lb0G38238
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.