Basic Information
Locus ID:
Sgl00536
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 7496025 | 7497788 | + | Sgl00536 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 47,077.61 Da | 51.20 | 79.32 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 209 | 243 | 1.7E-10 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 146 | 197 | 1.2E-6 | - |
| Pfam | PF00646 | F-box domain | 23 | 65 | 2.5E-4 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 118 | 379 | 1.12E-35 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 78 | 1.24E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 91 | 350 | 4.8E-31 | IPR015915 |
| SMART | SM00612 | kelc_smart | 159 | 207 | 3.9E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 209 | 257 | 5.2E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 25 | 65 | 0.007 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021855600.1 | F-box/kelch-repeat protein SKIP20 isoform X1 [Spinacia oleracea] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QG85 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology