HalophFGD

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Basic Information
Locus ID: Sgl00461
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chrA1 6561498 6571405 - Sgl00461
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.08 91,623.79 Da 54.08 75.31 -0.54
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 800 817 - -
MobiDBLite mobidb-lite consensus disorder prediction 565 638 - -
MobiDBLite mobidb-lite consensus disorder prediction 454 474 - -
MobiDBLite mobidb-lite consensus disorder prediction 459 474 - -
MobiDBLite mobidb-lite consensus disorder prediction 33 53 - -
MobiDBLite mobidb-lite consensus disorder prediction 36 50 - -
MobiDBLite mobidb-lite consensus disorder prediction 596 632 - -
MobiDBLite mobidb-lite consensus disorder prediction 800 828 - -
MobiDBLite mobidb-lite consensus disorder prediction 565 584 - -
Coils Coil Coil 528 555 - -
Coils Coil Coil 558 578 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT4G36630.1 Vacuolar sorting protein 39. 0
RefSeq XP_048493285.1 uncharacterized protein LOC125493805 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0J8EXG2 ULP_PROTEASE domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_6g145200 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 17 Sgl00240, Sgl00461, Sgl31428, Sgl36741, Sgl50062, Sgl53477 ...
Sgl65282, Sgl65285, Sgl65310, Sgl65311, Sgl69676, Sgl69679, Sgl69700, Sgl69701, Sgl74288, Sgl74311, Sgl77853
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.