Basic Information
Locus ID:
Sgl00460
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 6559770 | 6560618 | - | Sgl00460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 31,029.46 Da | 44.82 | 93.58 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01123 | Rad51_DMC1_radA | 9 | 268 | 4.34683E-74 | IPR033925 |
| Pfam | PF08423 | Rad51 | 7 | 267 | 7.5E-48 | IPR013632 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 8 | 268 | 2.42E-38 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 6 | 271 | 1.3E-59 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 5 | 182 | 41.762772 | IPR020588 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57450.1 | homolog of X-ray repair cross complementing 3 (XRCC3). Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation | 0 |
| RefSeq | XP_048493295.1 | DNA repair protein XRCC3 homolog [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKM5 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2WUU9 | DNA repair protein XRCC3-like protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112632pilonHSYRG00006 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||