Basic Information
Locus ID:
Sgl00418
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 6109052 | 6114668 | - | Sgl00418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 46,904.79 Da | 55.05 | 85.89 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 220 | 267 | 2.27208E-13 | - |
| Pfam | PF12906 | RING-variant domain | 220 | 266 | 5.5E-13 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 216 | 270 | 1.14E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 204 | 273 | 2.6E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 219 | 267 | 2.5E-19 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 212 | 273 | 21.063519 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 77 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06330.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021857690.1 | uncharacterized protein LOC110796910 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QS28 | RING-CH-type domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_148030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology