Basic Information
Locus ID:
Sgl00141
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Conserved oligomeric Golgi complex subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 1861464 | 1863356 | - | Sgl00141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 19,717.72 Da | 49.05 | 96.48 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10191 | Golgi complex component 7 (COG7) | 1 | 152 | 5.9E-26 | IPR019335 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | 86 | 178 | 2.8E-8 | - |
Gene Ontology
Biological Process:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51430.1 | conserved oligomeric Golgi complex component-related / COG complex component-related. Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology. | 0 |
| RefSeq | XP_021841606.1 | conserved oligomeric Golgi complex subunit 7 [Spinacia oleracea] | 0 |
| Q9FGN0 | Conserved oligomeric Golgi complex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=COG7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QBY1 | Conserved oligomeric Golgi complex subunit 7 OS=Spinacia oleracea OX=3562 GN=SOVF_196560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14110 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_24328 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah035377 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21490, Sbi_jg22325 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16256 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00008841 |
| Amaranthaceae | Suaeda glauca | 27 | Sgl00141, Sgl00549, Sgl05200, Sgl05553, Sgl12990, Sgl14644 ... |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000017348, gene:ENSEOMG00000018217 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0020330, CQ.Regalona.r1.2AG0022080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30180960 |
| Apiaceae | Apium graveolens | 1 | Ag10G02678 |
| Arecaceae | Cocos nucifera | 2 | COCNU_08G007560, COCNU_08G007570 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103712245 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1414.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G05449 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G51430.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012691m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g13590.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g028680.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0180 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0121 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g02200 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0037s00015.v1.0, Dusal.0037s00016.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g03520 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11447 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2332 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00040788 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G29165 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2623, BH06.2427, CH06.2712 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547750, gene-QOZ80_6BG0501400 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0736930.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_036170 |
| Poaceae | Oryza coarctata | 1 | Oco12G015110 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g45830.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G223100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103212, Pt_Chr0401296 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G031620, Chr05G009480, Chr10G019990, Chr11G002670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G797200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG065710, gene_TRIDC7BG059350 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G470900.1, TraesCS7B02G372700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb389950_P005 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g30972, Zma_g33232 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.1186 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g04150 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.1271 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12460, nbisL1-mrna-12569 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18598 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12839 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000010l.302 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00008928 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-560 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8902 |
| Salicaceae | Populus euphratica | 1 | populus_peu34209 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618895 |
| Solanaceae | Solanum chilense | 1 | SOLCI003172600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020335 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5377 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G0206 |
| Zosteraceae | Zostera marina | 1 | Zosma06g03710.v3.1 |