Basic Information
Locus ID:
Sgl00095
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 1167281 | 1168792 | - | Sgl00095 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 57,942.76 Da | 45.08 | 77.93 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 340 | 459 | 2.55413E-28 | IPR044730 |
| Pfam | PF13456 | Reverse transcriptase-like | 340 | 461 | 1.1E-24 | IPR002156 |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 147 | 230 | 4.7E-15 | IPR026960 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 337 | 464 | 2.66E-16 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 337 | 464 | 4.6E-19 | IPR036397 |
| ProSiteProfiles | PS50879 | RNase H domain profile. | 333 | 463 | 12.023953 | IPR002156 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42905.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_048500144.1 | uncharacterized protein LOC125497406 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A2N9FHD5 | RNase H type-1 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14485 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||