Basic Information
Locus ID:
Sgl00036
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA1 | 268178 | 284162 | + | Sgl00036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 306,113.78 Da | 52.78 | 85.79 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 214 | 545 | 3.7E-108 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 208 | 579 | 1.45E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 204 | 557 | 1.1E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 206 | 553 | 4.6E-163 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 208 | 545 | 120.310127 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 441 | 452 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 409 | 426 | 2.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 495 | 516 | 2.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 442 | 460 | 2.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 280 | 301 | 2.5E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2652 | 2676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2653 | 2676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2297 | 2321 | - | - |
| Coils | Coil | Coil | 1036 | 1056 | - | - |
| Coils | Coil | Coil | 1079 | 1099 | - | - |
| Coils | Coil | Coil | 1735 | 1762 | - | - |
| Coils | Coil | Coil | 1183 | 1210 | - | - |
| Coils | Coil | Coil | 2420 | 2503 | - | - |
| Coils | Coil | Coil | 805 | 839 | - | - |
| Coils | Coil | Coil | 559 | 579 | - | - |
| Coils | Coil | Coil | 2134 | 2211 | - | - |
| Coils | Coil | Coil | 905 | 953 | - | - |
| Coils | Coil | Coil | 2513 | 2547 | - | - |
| Coils | Coil | Coil | 1971 | 2005 | - | - |
| Coils | Coil | Coil | 641 | 668 | - | - |
| Coils | Coil | Coil | 2609 | 2643 | - | - |
| Coils | Coil | Coil | 1215 | 1253 | - | - |
| Coils | Coil | Coil | 2219 | 2246 | - | - |
| Coils | Coil | Coil | 1700 | 1727 | - | - |
| Coils | Coil | Coil | 961 | 981 | - | - |
| Coils | Coil | Coil | 1840 | 1867 | - | - |
| Coils | Coil | Coil | 1798 | 1818 | - | - |
| Coils | Coil | Coil | 2086 | 2127 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology