Basic Information
Locus ID:
Seu_jg8907
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 4540706 | 4550440 | - | Seu_jg8907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 189,169.89 Da | 50.09 | 75.95 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1416 | 1679 | 1.8799E-145 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 371 | 643 | 8.59806E-129 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 392 | 632 | 1.3E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1455 | 1621 | 2.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 437 | 609 | 3.56E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1409 | 1679 | 3.92E-79 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1366 | 1536 | 2.0E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1537 | 1680 | 3.0E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 436 | 609 | 1.1E-50 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1393 | 1680 | 2.0E-115 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1359 | 1679 | 59.393421 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 250 | - | - |
| Coils | Coil | Coil | 473 | 493 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_048502539.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology