Basic Information
Locus ID:
Seu_jg8734
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
NAC domain-containing protein 8 isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 2615080 | 2620355 | - | Seu_jg8734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 49,266.21 Da | 43.41 | 75.32 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 197 | 8.5E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 216 | 2.35E-38 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 220 | 5.9E-30 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 216 | 30.867336 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_021850014.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Spinacia oleracea] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1B2RWF4 | NAC transcription factor 25 OS=Haloxylon ammodendron OX=151230 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology