Basic Information
Locus ID:
Seu_jg8290
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 53604765 | 53614811 | + | Seu_jg8290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 60,321.71 Da | 44.41 | 75.03 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 251 | 476 | 2.7E-59 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 208 | 5.9E-77 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 267 | 442 | 3.5E-213 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 479 | 3.5E-213 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 529 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_010686045.2 | proteinaceous RNase P 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology