Basic Information
Locus ID:
Seu_jg8172
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 51815987 | 51828838 | + | Seu_jg8172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 82,388.98 Da | 44.86 | 71.53 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 474 | 734 | 2.45093E-85 | - |
| CDD | cd01989 | STK_N | 13 | 155 | 2.6273E-51 | - |
| Pfam | PF00069 | Protein kinase domain | 470 | 726 | 3.0E-41 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 14 | 129 | 7.7E-7 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 130 | 2.6E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 727 | 1.48E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 541 | 737 | 2.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 540 | 1.7E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 132 | 3.1E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 468 | 732 | 4.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 732 | 35.099682 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 586 | 598 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 267 | - | - |
| Coils | Coil | Coil | 404 | 424 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021716647.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LDB7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology