Basic Information
Locus ID:
Seu_jg8171
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 51805181 | 51812457 | + | Seu_jg8171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 86,204.35 Da | 50.16 | 72.32 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 15 | 154 | 1.46343E-47 | - |
| CDD | cd14066 | STKc_IRAK | 513 | 766 | 5.00985E-86 | - |
| Pfam | PF00582 | Universal stress protein family | 15 | 130 | 2.0E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 509 | 765 | 1.2E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 489 | 767 | 1.17E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 130 | 5.69E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 580 | 776 | 2.6E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 485 | 579 | 3.2E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 153 | 8.4E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 507 | 771 | 1.3E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 507 | 771 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 226 | - | - |
| Coils | Coil | Coil | 457 | 477 | - | - |
| Coils | Coil | Coil | 384 | 404 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26150.2 | - | 0 |
| RefSeq | XP_021716489.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LDB8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology