Basic Information
Locus ID:
Seu_jg7949
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 47628165 | 47642464 | + | Seu_jg7949 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 63,909.34 Da | 43.83 | 71.27 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 59 | 481 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 318 | 481 | 2.8E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 70 | 209 | 2.1E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 497 | 7.75E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 152 | 4.3E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 482 | 9.5E-79 | - |
| SMART | SM00220 | serkin_6 | 70 | 481 | 2.9E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 481 | 31.2411 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 99 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 197 | 209 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_010683926.2 | serine/threonine-protein kinase SRPK [Beta vulgaris subsp. vulgaris] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9REG8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_075680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology