Basic Information
Locus ID:
Seu_jg7647
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000009l | 40242458 | 40244200 | - | Seu_jg7647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 62,985.12 Da | 23.90 | 105.60 | 0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 77 | 456 | 5.7E-41 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 515 | 563 | 6.9E-18 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 71 | 505 | 6.7E-88 | - |
| PIRSF | PIRSF006060 | AA_transporter | 54 | 576 | 2.1E-60 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34960.1 | cationic amino acid transporter 5. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane. | 0 |
| RefSeq | XP_010678963.1 | cationic amino acid transporter 5 [Beta vulgaris subsp. vulgaris] | 0 |
| O64759 | Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RAM6 | AA_permease_C domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_087590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology