Basic Information
Locus ID:
Seu_jg709
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
WRKY20
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 8113818 | 8115431 | + | Seu_jg709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 40,706.43 Da | 39.49 | 51.85 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 163 | 220 | 5.7E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 33 | 89 | 1.2E-20 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 154 | 222 | 1.57E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 29 | 92 | 3.01E-21 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 19 | 93 | 1.7E-22 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 147 | 223 | 6.7E-30 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 32 | 91 | 1.0E-27 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 162 | 221 | 3.4E-31 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 157 | 222 | 31.846403 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 27 | 92 | 21.275719 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 118 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021851868.1 | WRKY transcription factor SUSIBA2-like [Spinacia oleracea] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RQN5 | WRKY domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_039590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology