Basic Information
Locus ID:
Seu_jg615
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 6932424 | 6935297 | - | Seu_jg615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 45,991.52 Da | 29.59 | 76.56 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 115 | 320 | 2.9E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 390 | 1.94E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 395 | 1.3E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 191 | 3.7E-27 | - |
| SMART | SM00220 | serkin_6 | 110 | 393 | 9.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 110 | 394 | 35.325825 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 116 | 139 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18610.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031389122.1 | probable serine/threonine-protein kinase PBL5 [Punica granatum] | 0 |
| Q1PDV6 | Serine/threonine-protein kinase PBL27 OS=Arabidopsis thaliana OX=3702 GN=PBL27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A218W641 | probable serine/threonine-protein kinase PBL5 OS=Punica granatum OX=22663 GN=LOC116201837 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg17351, Sbi_jg17352, Sbi_jg61994 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg615 |