Basic Information
Locus ID:
Seu_jg559
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 6384248 | 6387612 | + | Seu_jg559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.77 | 112,891.32 Da | 27.94 | 100.50 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 78 | 135 | 7.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 533 | 592 | 1.8E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 712 | 987 | 3.7E-46 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 507 | 524 | 0.0043 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 291 | 306 | 1.7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 72 | 2.1E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 707 | 991 | 2.43E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 235 | 584 | 7.46E-70 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 309 | 6.46E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 795 | 7.9E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 180 | 1.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 283 | 2.6E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 1012 | 2.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 483 | 624 | 9.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 384 | 9.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 482 | 3.5E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 241 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 216 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 507 | 531 | 77.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 991 | 5.6E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 121 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 998 | 37.643803 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 509 | 531 | 7.565642 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 436 | 458 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 841 | 853 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 579 | 592 | 6.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 510 | 523 | 6.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology