Basic Information
Locus ID:
Seu_jg5234
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 1316902 | 1321498 | + | Seu_jg5234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 79,748.95 Da | 29.22 | 75.43 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 178 | 209 | 0.1 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 610 | 631 | 8.4E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 548 | 582 | 0.0093 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 148 | 629 | 1.55E-25 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 144 | 339 | 6.0E-11 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 421 | 693 | 4.6E-26 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_010676033.1 | uncharacterized protein LOC104891943 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QL88 | Protein TolB OS=Spinacia oleracea OX=3562 GN=SOVF_171720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology