Basic Information
Locus ID:
Seu_jg5232
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 1284265 | 1292192 | + | Seu_jg5232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 81,718.66 Da | 33.40 | 74.02 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 481 | 519 | 0.048 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 180 | 199 | 0.012 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 399 | 414 | 0.0014 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 546 | 560 | 0.031 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 603 | 621 | 0.069 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 141 | 658 | 1.44E-31 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 137 | 313 | 7.4E-8 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 425 | 635 | 2.4E-22 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_021839109.1 | uncharacterized protein LOC110778873 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9QJM9 | Protein tolB OS=Spinacia oleracea OX=3562 GN=SOVF_171710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology