Basic Information
Locus ID:
Seu_jg4963
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 51571257 | 51577633 | + | Seu_jg4963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 10,188.98 Da | 54.33 | 70.31 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 96 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021857337.1 | uncharacterized protein LOC110796585 [Spinacia oleracea] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 11 | Sbi_jg17004, Sbi_jg1992, Sbi_jg24138, Sbi_jg25582 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16600, Seu_jg3296, Seu_jg4963 |