Basic Information
Locus ID:
Seu_jg4719
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 47625802 | 47626647 | + | Seu_jg4719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 32,312.28 Da | 52.49 | 83.52 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 12 | 251 | 1.42169E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 251 | 5.0E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 251 | 8.77E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 6.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 268 | 1.1E-56 | - |
| PIRSF | PIRSF000654 | ILK | 1 | 262 | 3.2E-59 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 6 | 254 | 39.537758 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 159 | 169 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 79 | 92 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 178 | 200 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 222 | 244 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 115 | 133 | 6.7E-14 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021759078.1 | serine/threonine-protein kinase HT1-like [Chenopodium quinoa] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HF72 | Protein kinase domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR07562 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg18428 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg18158, Seu_jg4719, Seu_jg4740 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0132s00026.v1.0 |