Basic Information
Locus ID:
Seu_jg4532
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the ATG8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 44470906 | 44473926 | + | Seu_jg4532 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 13,681.75 Da | 42.14 | 87.73 | -0.35 |
Protein Domain:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04136 (Autophagy - other)
map04136 (Autophagy - other)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04138 (Autophagy - yeast)
map04138 (Autophagy - yeast)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04212 (Longevity regulating pathway - worm)
map04212 (Longevity regulating pathway - worm)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
map04621 (NOD-like receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05630.1 | Ubiquitin-like superfamily protein. in the Arabidopsis autophagy pathway | 0 |
| RefSeq | XP_021755739.1 | autophagy-related protein 8C [Chenopodium quinoa] | 0 |
| M1C146 | Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LY77 | Autophagy-related protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology