Basic Information
Locus ID:
Seu_jg439
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 4939585 | 4943632 | + | Seu_jg439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.72 | 23,581.75 Da | 52.86 | 71.71 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 57 | 210 | 7.4E-80 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 56 | 163 | 2.49E-23 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 37 | 211 | 9.0E-83 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 211 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_010674074.1 | 60S ribosomal protein L18-2 [Beta vulgaris subsp. vulgaris] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | I1JQN0 | Ribosomal_L18e/L15P domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_03G215300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology