Basic Information
Locus ID:
Seu_jg4296
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
transposon protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 37653642 | 37665598 | + | Seu_jg4296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 32,455.42 Da | 60.12 | 79.86 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021771212.1 | uncharacterized protein LOC110735349 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A6C0T504 | Transpos_assoc domain-containing protein OS=Amaranthus palmeri OX=107608 GN=AP_R.00g000060-v1.0.a3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4807, Sbi_jg48468 |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg24673, Seu_jg27772, Seu_jg3965, Seu_jg4296 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00024131 |