halophFGD

Basic Information

Locus ID: Seu_jg4153

Species & Taxonomic ID: Salicornia europaea & 206448

Genome Assembly:

Description: LRR receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000011l	33767743	33768722	+	Seu_jg4153

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.22	20,261.96 Da	39.52	101.20	-0.27

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	47	159	1.07E-26	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	122	165	2.2E-8	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	37	121	1.5E-28	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	65	183	10.46412	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	143	155	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	71	93	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G21410.2	-
RefSeq	XP_021730926.1	cysteine-rich receptor-like protein kinase 5 [Chenopodium quinoa]
Swiss-Prot	Q8S9L6	Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1
TrEMBL	A0A803MST2	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia europaea	2	Seu_jg4153, Seu_jg4155
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000004745, gene:ENSEOMG00000035985