Basic Information
Locus ID:
Seu_jg4129
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 33180636 | 33181196 | + | Seu_jg4129 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 20,202.43 Da | 43.47 | 100.59 | 0.13 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021771798.1 | RING-H2 finger protein ATL11-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803KPC5 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_12013 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah005893 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg512 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg4129 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00008342, GOSA_00008343 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl24620, Sgl24646, Sgl29765, Sgl29773 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0009190, CQ.Regalona.r1.4BG0009300 |