Basic Information
Locus ID:
Seu_jg3898
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 24907650 | 24908834 | - | Seu_jg3898 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 43,823.01 Da | 35.39 | 97.21 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 145 | 166 | 0.073 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 1.5E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 283 | 365 | 7.74E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 275 | 6.23E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 372 | 3.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 189 | 3.0E-35 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 145 | 168 | 7.912173 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 146 | 159 | 5.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 236 | 249 | 5.4E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_010684727.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803MWV3 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology